Research output per year
Research output per year
Personal profile
Personal profile
Thomas Gaillard currently works at the Département de Biologie, École Polytechnique. Thomas does research in Theoretical Chemistry, Physical Chemistry and Bioinformatics. Their current project is 'Protein design with Proteus'.
Research interests
Biochemistry, Genetics and Molecular Biology, Chemestry
Education/Academic qualification
HDR (PhD Supervision Credentials)
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Collaborations and top research areas from the last five years
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Physics-Based Energy Functions for Computational Protein Design
Gaillard, T., 1 Jan 2026, (Accepted/In press) In: Proteins: Structure, Function and Genetics.Research output: Contribution to journal › Review article › peer-review
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Transition State-Based Computational Enzyme Design
Gaillard, T. & Simonson, T., 1 Jan 2026, Methods in Molecular Biology. Humana Press Inc., p. 165-186 22 p. (Methods in Molecular Biology; vol. 2979).Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
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Improved Physics-Based Single-Position Protein Sequence Redesign with a Residue-Pairwise Generalized Born Model
Gaillard, T., 16 Oct 2025, In: Journal of Physical Chemistry B. 129, 41, p. 10699-10710 12 p.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity
Bourgeois, G., Coureux, P. D., Lazennec-Schurdevin, C., Madru, C., Gaillard, T., Duchateau, M., Chamot-Rooke, J., Bourcier, S., Mechulam, Y. & Schmitt, E., 1 Dec 2025, In: Nature Communications . 16, 1, 348.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Adaptive landscape flattening allows the design of both enzyme: Substrate binding and catalytic power
Opuu, V., Nigro, G., Gaillard, T., Schmitt, E., Mechulam, Y. & Simonson, T., 1 Jan 2020, In: PLoS Computational Biology. 16, 1, e1007600.Research output: Contribution to journal › Article › peer-review
Open Access14 Citations (Scopus) -
Physics-based computational protein design: An update
Simonson, T., Mignon, D., Druart, K., Michael, E., Opuu, V., Polydorides, S., Villa, F., Gaillard, T., Panel, N. & Archontis, G., 24 Dec 2020, In: Journal of Physical Chemistry A. 124, 51, p. 10637-10648 12 p.Research output: Contribution to journal › Article › peer-review
26 Citations (Scopus) -
Evaluation of AutoDock and AutoDock Vina on the CASF-2013 Benchmark
Gaillard, T., 27 Aug 2018, In: Journal of Chemical Information and Modeling. 58, 8, p. 1697-1706 10 p.Research output: Contribution to journal › Article › peer-review
428 Citations (Scopus) -
Uncleaned crop seed sowing as a tool to conserve bromus grossus and restore species-rich arable-dependent plant communities
Piqueray, J., Gilliaux, V., Gaillard, T., Mahy, G. & Delescaille, L. M., 1 Jan 2018, In: Conservation Evidence. 15, p. 26-31 6 p.Research output: Contribution to journal › Article › peer-review
5 Citations (Scopus) -
Full Protein Sequence Redesign with an MMGBSA Energy Function
Gaillard, T. & Simonson, T., 10 Oct 2017, In: Journal of Chemical Theory and Computation. 13, 10, p. 4932-4943 12 p.Research output: Contribution to journal › Article › peer-review
12 Citations (Scopus) -
Participant Profiling and Pattern of Crop-Foraging in Chacma Baboons (Papio hamadryas ursinus) in Zimbabwe: Why Does Investigating Age–Sex Classes Matter?
Schweitzer, C., Gaillard, T., Guerbois, C., Fritz, H. & Petit, O., 1 Apr 2017, In: International Journal of Primatology. 38, 2, p. 207-223 17 p.Research output: Contribution to journal › Article › peer-review
25 Citations (Scopus)