TY - GEN
T1 - An Image Feature Mapping Model for Continuous Longitudinal Data Completion and Generation of Synthetic Patient Trajectories
AU - Chadebec, Clément
AU - Huijben, Evi M.C.
AU - Pluim, Josien P.W.
AU - Allassonnière, Stéphanie
AU - van Eijnatten, Maureen A.J.M.
N1 - Publisher Copyright:
© 2022, The Author(s), under exclusive license to Springer Nature Switzerland AG.
PY - 2022/1/1
Y1 - 2022/1/1
N2 - Longitudinal medical image data are becoming increasingly important for monitoring patient progression. However, such datasets are often small, incomplete, or have inconsistencies between observations. Thus, we propose a generative model that not only produces continuous trajectories of fully synthetic patient images, but also imputes missing data in existing trajectories, by estimating realistic progression over time. Our generative model is trained directly on features extracted from images and maps these into a linear trajectory in a Euclidean space defined with velocity, delay, and spatial parameters that are learned directly from the data. We evaluated our method on toy data and face images, both showing simulated trajectories mimicking progression in longitudinal data. Furthermore, we applied the proposed model on a complex neuroimaging database extracted from ADNI. All datasets show that the model is able to learn overall (disease) progression over time.
AB - Longitudinal medical image data are becoming increasingly important for monitoring patient progression. However, such datasets are often small, incomplete, or have inconsistencies between observations. Thus, we propose a generative model that not only produces continuous trajectories of fully synthetic patient images, but also imputes missing data in existing trajectories, by estimating realistic progression over time. Our generative model is trained directly on features extracted from images and maps these into a linear trajectory in a Euclidean space defined with velocity, delay, and spatial parameters that are learned directly from the data. We evaluated our method on toy data and face images, both showing simulated trajectories mimicking progression in longitudinal data. Furthermore, we applied the proposed model on a complex neuroimaging database extracted from ADNI. All datasets show that the model is able to learn overall (disease) progression over time.
KW - Generative model
KW - Longitudinal data
KW - Synthetic images
U2 - 10.1007/978-3-031-18576-2_6
DO - 10.1007/978-3-031-18576-2_6
M3 - Conference contribution
AN - SCOPUS:85141807785
SN - 9783031185755
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 55
EP - 64
BT - Deep Generative Models - 2nd MICCAI Workshop, DGM4MICCAI 2022, Held in Conjunction with MICCAI 2022, Proceedings
A2 - Mukhopadhyay, Anirban
A2 - Oksuz, Ilkay
A2 - Engelhardt, Sandy
A2 - Zhu, Dajiang
A2 - Yuan, Yixuan
PB - Springer Science and Business Media Deutschland GmbH
T2 - 2nd Workshop on Deep Generative Models for Medical Image Computing and Computer Assisted Intervention, DGM4MICCAI 2022, held in Conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022
Y2 - 22 September 2022 through 22 September 2022
ER -