TY - GEN
T1 - Clustering of longitudinal shape data sets using mixture of separate or branching trajectories
AU - Alzheimer’s Disease Neuroimaging Initiative
AU - Debavelaere, Vianney
AU - Bône, Alexandre
AU - Durrleman, Stanley
AU - Allassonnière, Stéphanie
N1 - Publisher Copyright:
© Springer Nature Switzerland AG 2019.
PY - 2019/1/1
Y1 - 2019/1/1
N2 - Several methods have been proposed recently to learn spatiotemporal models of shape progression from repeated observations of several subjects over time, i.e. a longitudinal data set. These methods summarize the population by a single common trajectory in a supervised manner. In this paper, we propose to extend such approaches to an unsupervised setting where a longitudinal data set is automatically clustered in different classes without labels. Our method learns for each cluster an average shape trajectory (or representative curve) and its variance in space and time. Representative trajectories are built as the combination of pieces of curves. This mixture model is flexible enough to handle independent trajectories for each cluster as well as fork and merge scenarios. The estimation of such non linear mixture models in high dimension is known to be difficult because of the trapping states effect that hampers the optimisation of cluster assignments during training. We address this issue by using a tempered version of the stochastic EM algorithm. Finally, we apply our algorithm on synthetic data to validate that a tempered scheme achieve better convergence. We show then how the method can be used to test different scenarios of hippocampus atrophy in ageing by using an heteregenous population of normal ageing individuals and mild cognitive impaired subjects.
AB - Several methods have been proposed recently to learn spatiotemporal models of shape progression from repeated observations of several subjects over time, i.e. a longitudinal data set. These methods summarize the population by a single common trajectory in a supervised manner. In this paper, we propose to extend such approaches to an unsupervised setting where a longitudinal data set is automatically clustered in different classes without labels. Our method learns for each cluster an average shape trajectory (or representative curve) and its variance in space and time. Representative trajectories are built as the combination of pieces of curves. This mixture model is flexible enough to handle independent trajectories for each cluster as well as fork and merge scenarios. The estimation of such non linear mixture models in high dimension is known to be difficult because of the trapping states effect that hampers the optimisation of cluster assignments during training. We address this issue by using a tempered version of the stochastic EM algorithm. Finally, we apply our algorithm on synthetic data to validate that a tempered scheme achieve better convergence. We show then how the method can be used to test different scenarios of hippocampus atrophy in ageing by using an heteregenous population of normal ageing individuals and mild cognitive impaired subjects.
KW - Branching population
KW - Longitudinal data analysis
KW - Mixture model
KW - Riemannian framework
U2 - 10.1007/978-3-030-32251-9_8
DO - 10.1007/978-3-030-32251-9_8
M3 - Conference contribution
AN - SCOPUS:85075665684
SN - 9783030322502
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 66
EP - 74
BT - Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings
A2 - Shen, Dinggang
A2 - Yap, Pew-Thian
A2 - Liu, Tianming
A2 - Peters, Terry M.
A2 - Khan, Ali
A2 - Staib, Lawrence H.
A2 - Essert, Caroline
A2 - Zhou, Sean
PB - Springer Science and Business Media Deutschland GmbH
T2 - 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019
Y2 - 13 October 2019 through 17 October 2019
ER -