Clustering of longitudinal shape data sets using mixture of separate or branching trajectories

Alzheimer’s Disease Neuroimaging Initiative

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Several methods have been proposed recently to learn spatiotemporal models of shape progression from repeated observations of several subjects over time, i.e. a longitudinal data set. These methods summarize the population by a single common trajectory in a supervised manner. In this paper, we propose to extend such approaches to an unsupervised setting where a longitudinal data set is automatically clustered in different classes without labels. Our method learns for each cluster an average shape trajectory (or representative curve) and its variance in space and time. Representative trajectories are built as the combination of pieces of curves. This mixture model is flexible enough to handle independent trajectories for each cluster as well as fork and merge scenarios. The estimation of such non linear mixture models in high dimension is known to be difficult because of the trapping states effect that hampers the optimisation of cluster assignments during training. We address this issue by using a tempered version of the stochastic EM algorithm. Finally, we apply our algorithm on synthetic data to validate that a tempered scheme achieve better convergence. We show then how the method can be used to test different scenarios of hippocampus atrophy in ageing by using an heteregenous population of normal ageing individuals and mild cognitive impaired subjects.

Original languageEnglish
Title of host publicationMedical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings
EditorsDinggang Shen, Pew-Thian Yap, Tianming Liu, Terry M. Peters, Ali Khan, Lawrence H. Staib, Caroline Essert, Sean Zhou
PublisherSpringer Science and Business Media Deutschland GmbH
Pages66-74
Number of pages9
ISBN (Print)9783030322502
DOIs
Publication statusPublished - 1 Jan 2019
Externally publishedYes
Event22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 - Shenzhen, China
Duration: 13 Oct 201917 Oct 2019

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume11767 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019
Country/TerritoryChina
CityShenzhen
Period13/10/1917/10/19

Keywords

  • Branching population
  • Longitudinal data analysis
  • Mixture model
  • Riemannian framework

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