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Efficient Computation of Topological Integral Transforms

  • University of Oxford
  • INRIA
  • Ecole Normale Supérieure de Lyon

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Topological integral transforms have found many applications in shape analysis, from prediction of clinical outcomes in brain cancer to analysis of barley seeds. Using Euler characteristic as a measure, these objects record rich geometric information on weighted polytopal complexes. While some implementations exist, they only enable discretized representations of the transforms, and they do not handle weighted complexes (such as for instance images). Moreover, recent hybrid transforms lack an implementation. In this paper, we introduce eucalc, a novel implementation of three topological integral transforms - the Euler characteristic transform, the Radon transform, and hybrid transforms - for weighted cubical complexes. Leveraging piecewise linear Morse theory and Euler calculus, the algorithms significantly reduce computational complexity by focusing on critical points. Our software provides exact representations of transforms, handles both binary and grayscale images, and supports multicore processing. It is publicly available as a C++ library with a Python wrapper. We present mathematical foundations, implementation details, and experimental evaluations, demonstrating eucalc's efficiency.

Original languageEnglish
Title of host publication22nd International Symposium on Experimental Algorithms, SEA 2024
EditorsLeo Liberti
PublisherSchloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing
ISBN (Electronic)9783959773256
DOIs
Publication statusPublished - 1 Jul 2024
Externally publishedYes
Event22nd International Symposium on Experimental Algorithms, SEA 2024 - Vienna, Austria
Duration: 23 Jul 202426 Jul 2024

Publication series

NameLeibniz International Proceedings in Informatics, LIPIcs
Volume301
ISSN (Print)1868-8969

Conference

Conference22nd International Symposium on Experimental Algorithms, SEA 2024
Country/TerritoryAustria
CityVienna
Period23/07/2426/07/24

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Euler calculus
  • Euler characteristic transform
  • Hybrid transforms
  • Topological data analysis
  • Topological integral transform

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