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General guidelines for sample preparation strategies in HR-μMAS NMR-based metabolomics of microscopic specimens

  • Covadonga Lucas-torres
  • , Thierry Bernard
  • , Gaspard Huber
  • , Patrick Berthault
  • , Yusuke Nishiyama
  • , Pancham S. Kandiyal
  • , Bénédicte Elena-herrmann
  • , Laurent Molin
  • , Florence Solari
  • , Anne Karine Bouzier-sore
  • , Alan Wong
  • Université Paris-Saclay
  • JEOL RESONANCE Inc.
  • Riken
  • Centre de Recherche UGA/Inserm U 1209/CNRS UMR 5309
  • IGFL, Université de Lyon, Université Lyon 1
  • Univ. Bordeaux

Research output: Contribution to journalArticlepeer-review

Abstract

The study of the metabolome within tissues, organisms, cells or biofluids can be carried out by several bioanalytical techniques. Among them, nuclear magnetic resonance (NMR) is one of the principal spectroscopic methods. This is due to a sample rotation technique, high-resolution magic angle spinning (HR‐MAS), which targets the analysis of heterogeneous specimens with a bulk sample mass from 5 to 10 mg. Recently, a new approach, high-resolution micro-magic angle spinning (HR-μMAS), has been introduced. It opens, for the first time, the possibility of investigating microscopic specimens (<500 μg) with NMR spectroscopy, strengthening the concept of homogeneous sampling in a heterogeneous specimen. As in all bioanalytical approaches, a clean and reliable sample preparation strategy is a significant component in designing metabolomics (or -omics, in general) studies. The sample preparation for HR‐μMAS is consequentially complicated by the μg-scale specimen and has yet to be addressed. This report details the strategies for three specimen types: biofluids, fluid matrices and tissues. It also provides the basis for designing future μMAS NMR studies of microscopic specimens.

Original languageEnglish
Article number54
JournalMetabolites
Volume10
Issue number2
DOIs
Publication statusPublished - 1 Feb 2020
Externally publishedYes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • High-resolution magic angle spinning
  • Metabolomics
  • Microscopic samples
  • NMR
  • Sample preparation

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