How to choose and optimize a classifier for your polarimetric imaging data

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Mueller polarimetry is a powerful characterization technique for a variety of samples and a promising optical-biopsy tool for early detection of cancer. Recent advances in Mueller imaging devices allow the collection of large ex-vivo and invivo image databases. Although the technique is sensitive to subtle changes in the micro-organization of tissue, the Mueller matrices of such complex media contain intertwined polarimetric effects and are difficult to interpret. To identify the polarimetric signature of a given tissue modification (cancerous or not), machine learning tools are particularly well suited. However, a statistically sound approach is needed to make the most out of these tools and avoid common pitfalls. We present a global statistical framework based on decision theory. It consists of a complete preprocessing and analysis pipeline for polarimetric bioimages. In the analysis stage, we use a loss-risk-based approach to automatically select the optimal classifier among a library of classifiers. The approach allows to determine the subset of polarimetric parameters of interest, to determine the parameters of the classifiers and to assess classifier performance using cross-validation. The proposed framework is illustrated with precancer detection on human ex-vivo cervical samples.

Original languageEnglish
Title of host publicationLabel-Free Biomedical Imaging and Sensing (LBIS) 2020
EditorsNatan T. Shaked, Oliver Hayden
PublisherSPIE
ISBN (Electronic)9781510632653
DOIs
Publication statusPublished - 1 Jan 2020
Externally publishedYes
EventLabel-Free Biomedical Imaging and Sensing ,LBIS 2020 - San Francisco, United States
Duration: 1 Feb 20204 Feb 2020

Publication series

NameProgress in Biomedical Optics and Imaging - Proceedings of SPIE
Volume11251
ISSN (Print)1605-7422

Conference

ConferenceLabel-Free Biomedical Imaging and Sensing ,LBIS 2020
Country/TerritoryUnited States
CitySan Francisco
Period1/02/204/02/20

Keywords

  • Biomedical optics
  • cancer diagnosis
  • optical biopsy
  • polarimetry

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