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Machine Learning Force Fields and Coarse-Grained Variables in Molecular Dynamics: Application to Materials and Biological Systems

  • Paraskevi Gkeka
  • , Gabriel Stoltz
  • , Amir Barati Farimani
  • , Zineb Belkacemi
  • , Michele Ceriotti
  • , John D. Chodera
  • , Aaron R. Dinner
  • , Andrew L. Ferguson
  • , Jean Bernard Maillet
  • , Hervé Minoux
  • , Christine Peter
  • , Fabio Pietrucci
  • , Ana Silveira
  • , Alexandre Tkatchenko
  • , Zofia Trstanova
  • , Rafal Wiewiora
  • , Tony Lelièvre

Research output: Contribution to journalReview articlepeer-review

Abstract

Machine learning encompasses tools and algorithms that are now becoming popular in almost all scientific and technological fields. This is true for molecular dynamics as well, where machine learning offers promises of extracting valuable information from the enormous amounts of data generated by simulation of complex systems. We provide here a review of our current understanding of goals, benefits, and limitations of machine learning techniques for computational studies on atomistic systems, focusing on the construction of empirical force fields from ab initio databases and the determination of reaction coordinates for free energy computation and enhanced sampling.

Original languageEnglish
Pages (from-to)4757-4775
Number of pages19
JournalJournal of Chemical Theory and Computation
Volume16
Issue number8
DOIs
Publication statusPublished - 11 Aug 2020

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