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Simple and Effective Graph Autoencoders with One-Hop Linear Models

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Over the last few years, graph autoencoders (AE) and variational autoencoders (VAE) emerged as powerful node embedding methods, with promising performances on challenging tasks such as link prediction and node clustering. Graph AE, VAE and most of their extensions rely on multi-layer graph convolutional networks (GCN) encoders to learn vector space representations of nodes. In this paper, we show that GCN encoders are actually unnecessarily complex for many applications. We propose to replace them by significantly simpler and more interpretable linear models w.r.t. the direct neighborhood (one-hop) adjacency matrix of the graph, involving fewer operations, fewer parameters and no activation function. For the two aforementioned tasks, we show that this simpler approach consistently reaches competitive performances w.r.t. GCN-based graph AE and VAE for numerous real-world graphs, including all benchmark datasets commonly used to evaluate graph AE and VAE. Based on these results, we also question the relevance of repeatedly using these datasets to compare complex graph AE and VAE.

Original languageEnglish
Title of host publicationMachine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2020, Proceedings
EditorsFrank Hutter, Kristian Kersting, Jefrey Lijffijt, Isabel Valera
PublisherSpringer Science and Business Media Deutschland GmbH
Pages319-334
Number of pages16
ISBN (Print)9783030676575
DOIs
Publication statusPublished - 1 Jan 2021
EventEuropean Conference on Machine Learning and Knowledge Discovery in Databases, ECML PKDD 2020 - Virtual, Online
Duration: 14 Sept 202018 Sept 2020

Publication series

NameLecture Notes in Computer Science
Volume12457 LNAI
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

ConferenceEuropean Conference on Machine Learning and Knowledge Discovery in Databases, ECML PKDD 2020
CityVirtual, Online
Period14/09/2018/09/20

Keywords

  • Autoencoders
  • Graph convolutional networks
  • Graph representation learning
  • Graphs
  • Linear encoders
  • Link prediction
  • Node clustering
  • Node embedding
  • Variational autoencoders

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