Swap, Shift and Trim to Edge Collapse a Filtration

Marc Glisse, Siddharth Pritam

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Boissonnat and Pritam introduced an algorithm to reduce a filtration of flag (or clique) complexes, which can in particular speed up the computation of its persistent homology. They used so-called edge collapse to reduce the input flag filtration and their reduction method required only the 1-skeleton of the filtration. In this paper we revisit the use of edge collapse for efficient computation of persistent homology. We first give a simple and intuitive explanation of the principles underlying that algorithm. This in turn allows us to propose various extensions including a zigzag filtration simplification algorithm. We finally show some experiments to better understand how it behaves.

Original languageEnglish
Title of host publication38th International Symposium on Computational Geometry, SoCG 2022
EditorsXavier Goaoc, Michael Kerber
PublisherSchloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing
ISBN (Electronic)9783959772273
DOIs
Publication statusPublished - 1 Jun 2022
Externally publishedYes
Event38th International Symposium on Computational Geometry, SoCG 2022 - Berlin, Germany
Duration: 7 Jun 202210 Jun 2022

Publication series

NameLeibniz International Proceedings in Informatics, LIPIcs
Volume224
ISSN (Print)1868-8969

Conference

Conference38th International Symposium on Computational Geometry, SoCG 2022
Country/TerritoryGermany
CityBerlin
Period7/06/2210/06/22

Keywords

  • edge collapse
  • flag complex
  • graph
  • persistent homology

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